Disulfidptosis-Related lncRNA for the Establishment of Novel Prognostic Signature and Therapeutic Response Prediction to Endometrial Cancer.

Disulfidptosis, a newly discovered cellular death mechanism initiated by disulfide stress, features elevated expression of SLC7A11 and restricted glucose availability, rendering it a possible therapeutic target for cancer. Endometrial cancer of the uterine corpus (ECUC) ranks among prevalent gynecological malignancies. Long non-coding RNAs (lncRNAs) have been implicated in ECUC's metabolic pathways, invasive capabilities, and metastatic processes. Yet, the prognostic implications of Disulfidptosis-Linked lncRNAs (DLLs) in ECUC remain ambiguous. Transcriptome and clinical datasets related to ECUC were sourced from The Cancer Genome Atlas (TCGA), while genes linked with disulfidptosis were identified from existing literature. A panel of ten DLLs was discerned through least absolute shrinkage and selection operator (LASSO) coupled with Cox regression methods to formulate and validate risk prognostic models. We engineered a nomogram for ECUC patient prognosis forecasting and further examined the model via gene set enrichment analysis (GSEA), principal component analysis (PCA), gene set analysis (GSA), immune profiling, and sensitivity to antineoplastic agents. Prognostic models employing a set of ten DLLs (including AC005034.2, AC020765.2, AL158071.4, AL161663.2, AP000787.1, CR392039.3, EMSLR, SEC24B-AS1, Z69733.1, Z94721.3) were established. Based on median risk values, patient samples were stratified into high- and low-risk cohorts, revealing notable differences in survival across both training and validation datasets. The risk scores, when amalgamated with clinical variables, acted as standalone predictors of prognosis. GSEA findings indicated that the high-risk category predominantly aligned with pathways like extracellular matrix interactions and cell adhesion molecules, suggesting a likely association with metastatic potential. Concurrently, we scrutinized disparities in immune function and tumor mutational burden across risk categories and identified anticancer drugs with likely efficacy. In summary, a set of ten DLLs proved useful in forecasting patient outcomes and holds potential for informing targeted therapeutic approaches in ECUC.

Development and validation of real-time recombinase polymerase amplification-based assays for detecting HPV16 and HPV18 DNA.

IMPORTANCE: HPV DNA screening is an effective approach for the prevention of cervical cancer. The novel real-time recombinase polymerase amplification-based HPV detection systems we developed constitute an improvement over the HPV detection methods currently used in clinical practice and should help to extend cervical cancer screening in the future, particularly in point-of-care test settings.

Single-cell whole-genome sequencing, haplotype analysis in prenatal diagnosis of monogenic diseases.

Monogenic inherited diseases are common causes of congenital disabilities, leading to severe economic and mental burdens on affected families. In our previous study, we demonstrated the validity of cell-based noninvasive prenatal testing (cbNIPT) in prenatal diagnosis by single-cell targeted sequencing. The present research further explored the feasibility of single-cell whole-genome sequencing (WGS) and haplotype analysis of various monogenic diseases with cbNIPT. Four families were recruited: one with inherited deafness, one with hemophilia, one with large vestibular aqueduct syndrome (LVAS), and one with no disease. Circulating trophoblast cells (cTBs) were obtained from maternal blood and analyzed by single-cell 15X WGS. Haplotype analysis showed that CFC178 (deafness family), CFC616 (hemophilia family), and CFC111 (LVAS family) inherited haplotypes from paternal and/or maternal pathogenic loci. Amniotic fluid or fetal villi samples from the deafness and hemophilia families confirmed these results. WGS performed better than targeted sequencing in genome coverage, allele dropout (ADO), and false-positive (FP) ratios. Our findings suggest that cbNIPT by WGS and haplotype analysis have great potential for use in prenatally diagnosing various monogenic diseases.

Quantitative Morphology of Polder Landscape Based on SOM Identification Model: Case Study of Typical Polders in the South of Yangtze River.

Landscape morphology is a significant area of landscape architecture research. One of the scientific and technological issues in recent landscape morphology research is the use of quantitative analysis technology driven by morphology indexes and computational models to describe, compare, and analyze form features. This article focuses on the form features of the polder landscape, based on existing theoretical and practical achievements in landscape morphology. First, we choose five landscape morphology indexes based on the morphological constituent units of the landscape (elongation, rectangular compactness, concavity, ellipse compactness, and fractal dimension). Then, using the self-organizing map (SOM), we create an identification model for clustering the types of constituent units. The experimental results show that the identification model can classify polder morphology and analyze the distribution of units using typical polders in the Yangtze River's south bank as study cases. This article presents a technical approach to polder landscape morphology classification as well as a reference and developable quantitative analysis method for landscape morphology research.

Decreased EMILIN2 correlates to metabolism phenotype and poor prognosis of ovarian cancer.

This study aimed to explore the function and related mechanisms of elastin microfibril interfacer 2 (EMILIN2) in ovarian cancer. First, the expression level of EMILIN2 was detected in patient tissues and its correlation with overall survival rate was analysed. Then, EMILIN2 was overexpressed in ovarian cancer cell lines to observe its function and effect on Warburg effect. By detecting its promoter region methylation, the epigenetic regulatory role was explored. Finally, through the luciferase reporter assay and siRNA tools, the regulatory mechanism of p53 on EMILIN2 was investigated. It was detected in clinical samples that down-regulated EMILIN2 was associated with poor prognosis of ovarian cancer. It was further found that EMILIN2 regulated the metabolic phenotype of ovarian cancer cells. The expression of EMILIN2 was epigenetically regulated by its promoter methylation. Also, it was found that p53 regulated the expression of EMILIN2 and the p53/EMILIN2 axis regulated the Warburg effect in ovarian cancer cells. EMILIN2 was inhibited by methylation in ovarian cancer. In summary, p53 can promote and regulate its transcription by binding to the promoter region of EMILIN2, thereby affecting the Warburg effect and inhibiting tumours. Therefore, EMILIN2 might be a potential target for clinical diagnosis and treatment of ovarian cancer.

Microplastic pollution in Larimichthys polyactis in the coastal area of Jiangsu, China.

We investigated microplastics (MPs) pollution in 349 Larimichthys polyactis specimens from the coastal area of Jiangsu Province, China. The MP abundance in L. polyactis was 1.03 ± 1.04 items/individual and 0.95 ± 0.92 items/10 g (wet weight). The MP abundance in specimens from the Haizhou Bay fishing ground was slightly higher than that in specimens from the Lvsi fishing ground. Spearman's correlation showed that MP abundance was positively correlated with body length when expressed as items/individual, but not items/10 g. The abundance in the gastrointestinal tract was slightly higher than that in the gills, but the differences were not significant for either measurement index. The MPs predominantly ingested by L. polyactis were <1 mm, fibrous, blue and had a cellophane composition. The MP pollution in L. polyactis in the coast of Jiangsu Province is at a medium to low level, as compared with other regions of China.

Photochemical degradation of ß-hexachlorocyclohexane in snow and ice.

Hexachlorocyclohexane (HCH), a typical organochloride pesticide, is one of the persistent organic pollutants. Despite the ban on technical grade HCH, it has been continuously observed at a steady level in the environment. The photochemical degradation of ß-HCH in snow and ice under ultraviolet (UV) irradiation was investigated in this study. The effects of pH as well as common chemical components in snow on the degradation kinetics were investigated. In addition, the photodegradation products were determined and the reaction mechanism was hypothesized. The results showed that under UV irradiation, ß-HCH can be photolyzed in snow and ice, with the photochemical degradation process conforming to the first-order kinetic equation. Changing the pH and adding Fe2+ had minimal effect on the photochemical degradation kinetics, while the presence of acetone, NO2-, NO3- and Fe3+ significantly inhibited the process. The addition of hydrogen peroxide slightly inhibited the photochemical degradation of ß-HCH. Finally, the reaction rate, products and degradation mechanism of ß-HCH in snow were compared with those in the ice phase. The photochemical degradation rate of ß-HCH in snow was approximately 24 times faster than that in the ice phase. The photolysis product of ß-HCH in snow was α-HCH, produced by the isomerization of ß-HCH. However, in ice, in addition to α-HCH, pentachlorocyclohexene was produced by dechlorination. The results of this study are helpful in understanding the transformation of organochlorine pesticides in snow and ice, as well as in providing a theoretical basis for snow and ice pollution prevention and control.

The photoconversion of gamma-hexachlorocyclohexane under UV irradiation in water, snow and ice.

The photochemistry of organic pollutants has received increasing attention in ice and snow. In this work, the photoconversion of gamma-hexachlorocyclohexane (γ-HCH) under UV irradiation was investigated in water, snow and ice. The photoconversion rate, products and mechanisms were inspected, and the effect of inorganic ions (NO2(-), NO3(-), HCO3(-) and Fe(2+)) was discussed. The results showed that γ-HCH could be photoconverted in water, snow and ice, with the photoconversion rate being fastest in snow, and slowest in ice. All photoconversion could be described by the first-order kinetics model. In water, snow and ice, the common photoproducts of γ-HCH were alpha-hexachlorocyclohexane (α-HCH) and pentachlorocyclohexene. α-HCH was generated by a change in the bonding of a chlorine atom in γ-HCH; pentachlorocyclohexene was generated by the removal of a molecule of chlorine hydride from a molecule of γ-HCH. Different concentrations of NO2(-), NO3(-) and HCO3(-) all inhibited the photoconversion of γ-HCH, and the inhibition effect decreased with increasing concentrations of NO2(-) and NO3(-), but increased with the increasing concentrations of HCO3(-). Different concentrations of Fe(2+) promoted the photoconversion of γ-HCH in water and ice, but had little effect in snow.

Osteopontin splice variants differentially exert clinicopathological features and biological functions in gastric cancer.

PURPOSE: Gastric cancer (GC) remains a leading cause of death worldwide, and an elevated expression of osteopontin (OPN) may correlate with its poor survival. Alternative splicing of OPN can result in three isoforms, OPN-a, OPN-b and OPN-c. The aim of our current study is to examine the expression pattern and biological functions of OPN splice variants in GC. METHODS: Firstly, we evaluated the expression of OPN splice variants in 7 gastric cell lines, 101 pairs of GC tissues and their adjacent non-tumor tissues by Quantative real-time PCR (QT-PCR). Gain-of-function experiments were subsequently performed to determine their diverse roles in malignant behaviors of GC. Besides, their differential effects on the regulation of crucial downstream molecules were further explored in the anti-apoptotic and pro-metastatic process. RESULTS: We found that OPN-b is the dominant kind of OPN isoform in GC cell lines. Although the expression levels of three variants were all elevated in GC tissues, increased OPN-b or OPN-c expression could correlate with clinicopathological features. Functional analyses further showed that OPN-b most strongly promoted GC cell survival possibly by regulation of Bcl-2 family proteins and CD44v expressions. Moreover, OPN-c most effectively stimulated GC metastatic activity by increasing secretion of MMP-2, uPa, and IL-8. CONCLUSIONS: Our results suggest that OPN splice variants differentially exert clinicopathological features and biological functions in GC. Therefore, focusing on specific OPN isoform could be a novel direction for developing diagnostic and therapeutic approaches in GC.

Elevated urinary levels of kidney injury molecule-1 among Chinese factory workers exposed to trichloroethylene.

Epidemiological studies suggest that trichloroethylene (TCE) exposure may be associated with renal cancer. The biological mechanisms involved are not exactly known although nephrotoxicity is believed to play a role. Studies on TCE nephrotoxicity among humans, however, have been largely inconsistent. We studied kidney toxicity in Chinese factory workers exposed to TCE using novel sensitive nephrotoxicity markers. Eighty healthy workers exposed to TCE and 45 comparable unexposed controls were included in the present analyses. Personal TCE exposure measurements were taken over a 2-week period before urine collection. Ninety-six percent of workers were exposed to TCE below the current US Occupational Safety and Health Administration permissible exposure limit (100 ppm 8h TWA), with a mean (SD) of 22.2 (35.9) ppm. Kidney injury molecule-1 (KIM-1) and Pi-glutathione S transferase (GST) alpha were elevated among the exposed subjects as compared with the unexposed controls with a strong exposure-response association between individual estimates of TCE exposure and KIM-1 (P < 0.0001). This is the first report to use a set of sensitive nephrotoxicity markers to study the possible effects of TCE on the kidneys. The findings suggest that at relatively low occupational exposure levels a toxic effect on the kidneys can be observed. This finding supports the biological plausibility of linking TCE exposure and renal cancer.

Kinetics and mechanism of para-chlorophenol photoconversion with the presence of nitrite in ice.

The photochemistry of para-chlorophenol (4-CP) under UV irradiation by using a 125-W high-pressure mercury lamp as light source with the presence of nitrite in a solid water ice matrix had been studied. The experiments were carried out in a photochemical cold chamber reactor at -14 to -12 degrees C. Each influence factor of the 4-CP photoconversion kinetics in the water ice was inspected. The results show that the 4-CP photoconversion obeys the first-order kinetics model and the initial concentration of 4-CP, the initial concentration of nitrite, pH value, light intensity, inorganic ions and the water quality all have significant influence on the photoconversion rate. In addition, nine intermediate products were characterized by GC-MS, HPLC-ESI-MS and HPLC techniques and the possible photoconversion mechanism was proposed accordingly. It is concluded that the mechanism and photoproducts of 4-CP photolysis in ice are changed due to the presence of NO(2)(-).